External resources – t3connect.org

Find below a wider list of references and resources used in the T3Connect course.

Use the drop-down list below to select a category: course design, curriculum, evaluation, data visualisation, competencies, Ethics, building institutional capacity.

The list can also be browsed using the Search bar on the right.

The training materials designed specifically for the T3Connect courses will be published on a GitHub repository soon.

Content	Tags	Title	Authors	Link	Keywords	hf:doc_tags
Website	data visualisation	THE GLOBAL HEALTH OBSERVATORY	WHO	Open in a new tab		data-visualisation
Website	data visualisation	Microbe – Measuring Infectious Causes and Resistance Outcomes for Burden Estimation	Institute for Health Metrics and Evaluation (IHME)	Open in a new tab		data-visualisation
Website	data visualisation	Our World in Data	Our World in Data	Open in a new tab		data-visualisation
Website	data visualisation	Interactive data visuals	Institute for Health Metrics and Evaluation (IHME)	Open in a new tab		data-visualisation
Website	data visualisation	ShipMap	UCL Energy Institute	Open in a new tab		data-visualisation
Website	data visualisation	WorldPop	WorldPop	Open in a new tab		data-visualisation
Website	data visualisation	Observable	Observable	Open in a new tab		data-visualisation
Book	data visualisation	Fundamentals of Data Visualization	Claus O. Wilke	Open in a new tab		data-visualisation
Website	data visualisation	Visualising Data	Andy Kirk	Open in a new tab		data-visualisation
Article	Genomic Epidemiology	WHO Catalogue of mutations in Mycobacterium tuberculosis complex and their association with drug resistance.	WHO	Open in a new tab	Mycobacterium tuberculosis	genomic-epidemiology
Report	Genomic Epidemiology	WHO report on The use of next-generation sequencing technologies for the detection of mutations associated with drug resistance in Mycobacterium tuberculosis complex: technical guide	WHO	Open in a new tab	Mycobacterium tuberculosis	genomic-epidemiology
Guidance	Genomic Epidemiology	US CDC Guide to the Application of Genotyping to Tuberculosis Prevention and Control	CDC	Open in a new tab	Mycobacterium tuberculosis	genomic-epidemiology
Guidance	Genomic Epidemiology	UKHSA guidance on Mycobacterium tuberculosis whole-genome sequencing and cluster investigation handbook	UKHSA	Open in a new tab	Mycobacterium tuberculosis	genomic-epidemiology
Report	Genomic Epidemiology	PHE Expert opinion on whole genome sequencing for public health surveillance	PHG Foundation	Open in a new tab	AMR; surveillance; whole genome sequencing; WGS	genomic-epidemiology
Report	Genomic Epidemiology	PHG foundation report Pathogen Genomics Into Practice	PHG Foundation	Open in a new tab	AMR; surveillance; whole genome sequencing; WGS	genomic-epidemiology
Report	Genomic Epidemiology	FIND report on Sequencing for antimicrobial resistance surveillance	PHG Foundation for FIND	Open in a new tab	AMR; surveillance	genomic-epidemiology
Protocol	Genomic Epidemiology	Use of Whole Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States	FDA	Open in a new tab	AMR; whole genome sequencing; WGS	genomic-epidemiology
Report	Genomic Epidemiology	GLASS 2020 report on Whole-genome sequencing for surveillance of antimicrobial resistance	WHO	Open in a new tab	whole genome sequencing; WGS	genomic-epidemiology
Protocol	Genomic Epidemiology	ISO on Microbiology of the food chain — Whole genome sequencing for typing and genomic characterization of bacteria — General requirements and guidance	ISO	Open in a new tab	whole genome sequencing; WGS	genomic-epidemiology
Protocol	Genomic Epidemiology	The use of next-generation sequencing technologies for the detection of mutations associated with drug resistance in Mycobacterium tuberculosis complex: technical guide	WHO	Open in a new tab	AMR; whole genome sequencing; WGS	genomic-epidemiology
General presentation	Genomic Epidemiology	Global Microbial Identifier	GMI - Global Microbial Identifier	Open in a new tab		genomic-epidemiology
Article	Genomic Epidemiology	Whole Genome Sequencing Reveals Potential Spread of Clostridium Difficile between Humans and Farm Animals in the Netherlands; 2002 to 2011.	Knetsch; C. W.; et al.	Open in a new tab	whole genome sequencing; WGS	genomic-epidemiology
Article	Genomic Epidemiology	Towards a global antibiotic resistance surveillance system: A primer for a roadmap.	Grundmann; H. (2014).	Open in a new tab	AMR	genomic-epidemiology
Article	Genomic Epidemiology	Microreact: Visualizing and sharing data for genomic epidemiology and phylogeography.	Argimón; S.; Abudahab; K.; Goater; R. J. E.; Fedosejev; A.; Bhai; J.; Glasner; C.; Feil; E. J.; Holden; M. T. G.; Yeats; C. A.; Grundmann; H.; Spratt; B. G.; & Aanensen; D. M.	Open in a new tab	microreact; data visualisation	genomic-epidemiology
Article	Genomic Epidemiology	Long read sequencing reveals genomic diversity and associated plasmid movement of carbapenemase-producing bacteria in a UK hospital over six years.	Roberts; L.; Enoch; D. A.; Khokhar; F.; Blackwell; G. A.; Wilson; H.; Warne; B.; Gouliouris; T.; Iqbal; Z.; & Torok; M. E.	Open in a new tab	plasmid	genomic-epidemiology
Protocol	Genomic Epidemiology	Transport and storage of samples: Best Practice Guideline for Primary Care	NHS Oxford University Hospitals.	Open in a new tab	storage; collection	genomic-epidemiology
Article	Genomic Epidemiology	International Charter of principles for sharing bio-specimens and data.	Mascalzoni; D.; Dove; E. S.; Rubinstein; Y.; Dawkins; H. J. S.; Kole; A.; McCormack; P.; Woods; S.; Riess; O.; Schaefer; F.; Lochmüller; H.; Knoppers; B. M.; & Hansson; M	Open in a new tab	specimen collection; sample handling	genomic-epidemiology
Article	Genomic Epidemiology	The use of whole-genome sequencing in cluster investigation of a multidrug-resistant tuberculosis outbreak.	Lalor; M. K.; Casali; N.; Walker; T. M.; Anderson; L. F.; Davidson; J. A.; Ratna; N.; Mullarkey; C.; Gent; M.; Foster; K.; Brown; T.; Magee; J.; Barrett; A.; Crook; D. W.; Drobniewski; F.; Thomas; H. L.; & Abubakar; I. (2018).	Open in a new tab	whole genome sequencing; WGS	genomic-epidemiology
Article	Genomic Epidemiology	Fundamental principle of clinical specimen collection.	Kumar; V.	Open in a new tab	specimen collection; sample handling	genomic-epidemiology
Protocol	Genomic Epidemiology	ICH E18 Guideline on genomic sampling and management of data.	European Medicines Agency	Open in a new tab	genomic sampling	genomic-epidemiology
Protocol	Genomic Epidemiology	Community Infection Prevention and Control Policy for Care Home settings.	Harrogate and District NHS Foundation Trust.	Open in a new tab		genomic-epidemiology
Protocol	Genomic Epidemiology	Collection and presevation.	WHO	Open in a new tab	sample handling	genomic-epidemiology
Article	Genomic Epidemiology	Mycobacterium tuberculosis transmission in Birmingham; UK; 2009–19: An observational study	Timothy M. Walker; Marc Choisy; Martin Dedicoat; Philip G. Drennan; David Wyllie; Fan Yang-Turner; Derrick W. Crook; Esther R. Robinson; A. Sarah Walker; E. Grace Smith; Timothy E.A. Peto	Open in a new tab	Mycobacterium tuberculosis; sample handling	genomic-epidemiology
Article	Pathogen Genomics Into Practice	Luheshi; L. R.; Sobia; Moorthie; Sowmiya. (2015). Pathogen Genomics Into Practice. PHG Foundation.	Leila Luheshi; Sobia Raza; Sowmiya Moorthie; Alison Hall; Laura Blackburn; Chris Rands; Gurdeep Sagoo; Susmita Chowdhury; Mark Kroese and Hilary Burton	Open in a new tab		pathogen-genomics-into-practice
Article	Public health	Implementing pathogen genomics: A case study. (n.d.). GOV.UK.	Kathie Grant; Claire Jenkins; Cath Arnold; Jonathan Green; Maria Zambon	Open in a new tab		public-health
Article	Public health	Ten recommendations for supporting open pathogen genomic analysis in public health	Allison Black	Open in a new tab		public-health
Article	Ethics/legal/social challenges of pathogen genomics	Ethical challenges in pathogen sequencing: a systematic scoping review	Stephanie Johnson	Open in a new tab		ethics-legal-social-challenges-of-pathogen-genomics
Article	Ethics/legal/social challenges of pathogen genomics	Ethical Challenges Associated with Pathogen and Host Genetics in Infectious Disease	Richard Milne	Open in a new tab		ethics-legal-social-challenges-of-pathogen-genomics
Article	Ethics/legal/social challenges of pathogen genomics	The ethics of sequencing infectious disease pathogens for clinical and public health	Stephanie B. Johnson	Open in a new tab		ethics-legal-social-challenges-of-pathogen-genomics
Blog article	Moving to virtual	A case study for taking your short bioinformatics courses online: The Ensembl browser webinar series	Ben Moore	Open in a new tab		moving-to-virtual
Blog article	Moving to virtual	OU guide to good practice for online collaboration	The Open University	Open in a new tab		moving-to-virtual
Article	Moving to virtual	Evaluating Learning Designer	Diana Laurillard	Open in a new tab		moving-to-virtual
Blog article	Moving to virtual	Blog on learning technology	ALT	Open in a new tab		moving-to-virtual
Article	Moving to virtual	Lessons learned when moving SIB Training courses from in-person to online – anything in bioinformatics can be taught online; but not anyhow	Patricia M. Palagi	Open in a new tab		moving-to-virtual
Article	Competencies	Core competencies in genetics for healthcare professionals: results from a literature review and a Delphi method	Alessia Tognetto	Open in a new tab		competencies
Article	Competencies	Methods of Genomic Competency Integration in Practice	Jean Jenkins	Open in a new tab		competencies
Article	Competencies	The African Genomic Medicine Training Initiative (AGMT): Showcasing a Community and Framework Driven Genomic Medicine Training for Nurses in Africa	AGMT	Open in a new tab		competencies
Article	Rubrics	The Mastery Rubric for Bioinformatics: A tool to support design and evaluation of career-spanning education and training	Rochelle E. Tractenberg	Open in a new tab		rubrics
Report	Competencies	NHS Report: Developing Clinical Bioinformatics Training in the NHS – a timeline for action;	NHS	Open in a new tab		competencies
Article	Competencies	Design of a Genomics Curriculum: Competencies for Practicing Pathologists	Jennifer Laudadio	Open in a new tab		competencies
Article	Competencies	The development and application of bioinformatics core competencies to improve bioinformatics training and education	Nicola Mulder	Open in a new tab		competencies
Website	Competencies	ISCB V3 Bioinformatics Competency Framework	ISCB	Open in a new tab		competencies
MOOC	Evaluation	Online teaching: Evaluating and improving courses.	Perryman; L.; Ferguson; R.; Weller; M.; Sargent; J.; Papathoma; T. and Rees; T.	Open in a new tab		evaluation
Handbook	Evaluation	W.K. Kellogg Foundation Evaluation Handbook	Kellogg Foundation	Open in a new tab		evaluation
Book	Evaluation	Evaluating Training Programs: The Four Levels	Donald Kirkpatrick; James Kirkpatrick Berrett-Koehler	Open in a new tab		evaluation
Article	Evaluation	Talk about walkabout: evaluation of a flexible learning initiative		Open in a new tab		evaluation
Article	Evaluation	Evaluation of a TtT programme – Developing sustainable capacity-building in mental health research: implementation outcomes of training of trainers in systematic reviewing		Open in a new tab		evaluation
Protocol	Evaluation	Massive Open Online Courses (MOOC) Evaluation Methods: Protocol for a Systematic Review		Open in a new tab		evaluation
Article	Evaluation	Data Collection Approaches to Enable Evaluation of a Massive Open Online Course About Data Science for Continuing Education in Health Care: Case Study		Open in a new tab		evaluation
Website	Evaluation	Metrics for Evaluating Effectiveness of Genomics Education and Training Programs		Open in a new tab		evaluation
Website	Teaching strategies	Benefits and Cons of using virtual labs – Why Are Virtual Labs Crucial for the New Normal?		Open in a new tab		teaching-strategies
Website	Teaching strategies	Teaching strategies – 10 effective teaching strategies		Open in a new tab		teaching-strategies
Website	Learning environments	A positive learning experience		Open in a new tab		learning-environments
Website	Learning environments	A Personal Experience Of Positive And Negative Learning Strategies		Open in a new tab		learning-environments
Article	Learning environments	Positive and negative learning experiences		Open in a new tab		learning-environments
Blog article	Learning environments	Characteristics of positive learning environment		Open in a new tab		learning-environments
Article	Learning environments	Students’ reflections on the relationships between safe learning environments; learning challenge and positive experiences of learning in a simulated GP clinic		Open in a new tab		learning-environments
Resources website	Course design	H3ABioNet training pages and resources	H3ABioNet	Open in a new tab		course-design
Guideline	Course design	H3ABioNet training guide/training support pack	H3ABioNet	Open in a new tab		course-design
Article	Course design	Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa	Verena Ras	Open in a new tab		course-design
Article	Course design	Designing a course model for distance-based online bioinformatics training in Africa: The H3ABioNet experience	H3ABioNet	Open in a new tab		course-design
Protocol	Examples of protocols used in training courses on Laboratory Methods for Genomics	Protocol for Bacterial Whole Genome Sequencing	The Centre for Genomic Pathogen Surveillance; Oxford; United Kingdom	Open in a new tab		examples-of-protocols-used-in-training-courses-on-laboratory-methods-for-genomics
Protocol	Examples of protocols used in training courses on Laboratory Methods for Genomics	Protocol for Normalisation & Pooling of Multiplexed Libraries for WGS	The Centre for Genomic Pathogen Surveillance; Oxford; United Kingdom	Open in a new tab		examples-of-protocols-used-in-training-courses-on-laboratory-methods-for-genomics
Protocol	Examples of protocols used in training courses on Laboratory Methods for Genomics	Protocol for Bacterial DNA Library QC	The Centre for Genomic Pathogen Surveillance; Oxford; United Kingdom	Open in a new tab		examples-of-protocols-used-in-training-courses-on-laboratory-methods-for-genomics
Protocol	Examples of protocols used in training courses on Laboratory Methods for Genomics	Protocol for Bacterial DNA Library Construction for WGS:	The Centre for Genomic Pathogen Surveillance; Oxford; United Kingdom	Open in a new tab		examples-of-protocols-used-in-training-courses-on-laboratory-methods-for-genomics
Protocol	Examples of protocols used in training courses on Laboratory Methods for Genomics	Genomic DNA Quantification using a Qubit Fluorometer	The Centre for Genomic Pathogen Surveillance; Oxford; United Kingdom	Open in a new tab		examples-of-protocols-used-in-training-courses-on-laboratory-methods-for-genomics
Protocol	Examples of protocols used in training courses on Laboratory Methods for Genomics	Genomic DNA Purity Measurement using a Nanodrop Spectrophotometer	The Centre for Genomic Pathogen Surveillance; Oxford; United Kingdom	Open in a new tab		examples-of-protocols-used-in-training-courses-on-laboratory-methods-for-genomics
Protocol	Examples of protocols used in training courses on Laboratory Methods for Genomics	Protocols for Bacterial Genomic DNA isolation	The Centre for Genomic Pathogen Surveillance; Oxford; United Kingdom	Open in a new tab		examples-of-protocols-used-in-training-courses-on-laboratory-methods-for-genomics
Protocol	Examples of protocols used in training courses on Laboratory Methods for Genomics	Protocol for DNA transport	The Centre for Genomic Pathogen Surveillance; Oxford; United Kingdom	Open in a new tab		examples-of-protocols-used-in-training-courses-on-laboratory-methods-for-genomics
Training materials	Training materials	Training materials for the online seminar on the Ensembl Genome browser	EMBL-EBI	Open in a new tab		training-materials
Website	Toolkits and training materials	AuthorAID Training of Trainers Toolkit	INASP	Open in a new tab		toolkits-and-training-materials
Website	Toolkits and training materials	Train the trainer: administering and facilitating effective training events	INASP	Open in a new tab		toolkits-and-training-materials
Website	Toolkits and training materials	A tailor-made toolkit for trainers and practitioners	INASP	Open in a new tab		toolkits-and-training-materials
Book	Learning Theories	Revised Bloom’s taxonomy	L. W. Anderson and David R. Krathwohl	Open in a new tab		learning-theories
Book	Learning Theories	Blooms taxonomy	Patricia Armstrong; Vanderbilt University Center for Teaching	Open in a new tab		learning-theories
Webinar	Learning Theories	Conversational framework	Diana Laurillard	Open in a new tab		learning-theories
Book	Learning Theories	How People learn		Open in a new tab		learning-theories
Article	Learning Theories	AMEE Guide No 20: The good teacher is more than a lecturer – the twelve roles of the teacher	R.M. Harden; Joy Crosby	Open in a new tab		learning-theories
Article	Learning Theories	Needs Assessment for Informing Extension Professional Development Trainings on Teaching Adult Learners	Nathan W. Conner	Open in a new tab		learning-theories
Article	Learning Theories	Adult learning theories: Implications for learning and teaching in medical education:	David C. M. Taylor	Open in a new tab		learning-theories
Article	Assessment	Best practices in summative assessment	Kibble JD	Open in a new tab		assessment
Article	Assessment	Beyond formative: assessments to enrich student learning	Kulamakan Kulasegaram; Patangi K. Rangachari	Open in a new tab		assessment
Article	Course design	Impacts of incorporating personal genome sequencing into graduate genomics education: a longitudinal study over three course years	Michael D. Linderman; Saskia C. Sanderson; Ali Bashir; George A. Diaz; Andrew Kasarskis; Randi Zinberg; Milind Mahajan; Sabrina A. Suckiel; Micol Zweig & Eric E. Schadt	Open in a new tab		course-design
Article	Course design	A Curricular Bioinformatics Approach to Teaching Undergraduates to Analyze Metagenomic Datasets Using R	Anne E. Kruchten	Open in a new tab	Metagenomics; R; undergraduates	course-design
Article	Curriculum development and Instructional design	Application of Kern’s Six-step approach to curriculum development by global health residents	Leigh R Sweet; Debra L Palazzi	Open in a new tab		curriculum-development-and-instructional-design
University resource	Curriculum development and Instructional design	Models of course design and steps for course development	University of Toronto	Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	The Phoenix Rising: Emergent models of instructional design	Sonja Irlbeck	Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	A Curricular Bioinformatics Approach to Teaching Undergraduates to Analyze Metagenomic Datasets Using R	Anne E. Kruchten	Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	Application of Kern’s Six-step approach to curriculum development by global health residents.	Leigh R Sweet; Debra L Palazzi	Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	Instructional Design in Blended Learning: Theoretical Foundations and Guidelines for Practice	Jesús Valverde-Berrocoso; María Rosa Fernández-Sánchez	Open in a new tab		curriculum-development-and-instructional-design
Website	Curriculum development and Instructional design	Instructional Design Models: Comparing ADDIE; Bloom; Gagne; & Merrill		Open in a new tab		curriculum-development-and-instructional-design
Blog article	Curriculum development and Instructional design	A Quick Guide to Four Instructional Design Models		Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	Nine quick tips for efficient bioinformatics curriculum development and training	Susan McClatchy; Kristin M. Bass; Daniel M. Gatti; Adam Moylan; Gary Churchill	Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	Course design: Considerations for trainers – a Professional Guide	Allegra Via; Patricia M. Palagi; Jessica M. Lindvall; Rochelle E. Tractenberg; Teresa K. Attwood; The GOBLET Foundation	Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	Guidelines for curriculum and course development in higher education and training	Rochelle E. Tractenberg; Jessica M. Lindvall; Teresa Attwood; Allegra Via	Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	Applying ADDIE Model to Ideate Precision Medicine in a Polytechnic Biomedical Science Programme	Wee Hong Woo	Open in a new tab		curriculum-development-and-instructional-design
Article	Curriculum development and Instructional design	Applying learning theories and instructional design models for effective instruction	Khalil MK; Elkhider IA	Open in a new tab		curriculum-development-and-instructional-design
University resource	Rubrics	What is a rubric	The University of Texas at Austin	Open in a new tab	rubric definition	rubrics
Article	Rubrics	Using Rubrics To Promote Thinking and Learning	Heidi Goodrich Andrade	Open in a new tab	instruction; assessment	rubrics
Article	Rubrics	Appropriate Criteria: Key to Effective Rubrics Susan M. Brookhart; Department of Educational Foundations and Leadership; Duquesne University; Pittsburgh; PA; United States	Susan M. Brookhart	Open in a new tab	rating-scale language versus quality	rubrics
Article	Rubrics	A Mastery Rubric: guiding curriculum design; admissions and development of course objectives	Rochelle E. Tractenberg; Jason G. Umans; Robert J. McCarter	Open in a new tab	physicians; clinical research; reflection; cognitive self-monitoring	rubrics
Article	Peer review	Peer Feedback Marking: Developing Peer Assessment	Nancy Falchikov	Open in a new tab	peer assessment; critical feedback; Peer Feedback Marking	peer-review
Article	Peer review	Rethinking feedback practices in higher education: a peer review perspective.	David Nicola; Avril Thomson & Caroline Breslin	Open in a new tab	feedback reviews; higher education	peer-review
Course page	Building institutional and regional capacity in genomics through train the trainer programmes	EMBL-EBI Train the Trainer	EMBL-EBI	Open in a new tab	Train-the-trainer	building-institutional-and-regional-capacity-in-genomics-through-train-the-trainer-programmes
Course page	Building institutional and regional capacity in genomics through train the trainer programmes	Teaching approaches used in Train the Trainer: Capacity building for genomic surveillance of AMR in low- and middle-income countries course	Wellcome Connecting Science	Open in a new tab	Train-the-trainer; MOOC; FutureLearn	building-institutional-and-regional-capacity-in-genomics-through-train-the-trainer-programmes
Article	Building institutional and regional capacity in genomics through train the trainer programmes	From trainees to trainers to instructors: Sustainably building a national capacity in bioinformatics training	Annette McGrath; Katherine Champ; Catherine A. Shang; Ellen van Dam ;Cath Brooksbank; Sarah L. Morgan	Open in a new tab	Train-the-trainer; bioinformatics; Australia	building-institutional-and-regional-capacity-in-genomics-through-train-the-trainer-programmes
Article	Building institutional and regional capacity in genomics through train the trainer programmes	Train-the-trainer as an effective approach to building global networks of experts in genomic surveillance of AMR	Monica Abrudan; Alice Matimba; Dusanka Nikolic; Darren Hughes; Silvia Argimón; Mihir Kekre; Anthony Underwood; David M Aanensen	Open in a new tab	Train-the-trainer; LMICS; antimicrobial resistance	building-institutional-and-regional-capacity-in-genomics-through-train-the-trainer-programmes
Promo video	Building institutional and regional capacity in genomics through train the trainer programmes	Video presenting the TtT	Wellcome Connecting Science	Open in a new tab	Train-the-trainer; LMICS; antimicrobial resistance	building-institutional-and-regional-capacity-in-genomics-through-train-the-trainer-programmes
Course announcement	Building institutional and regional capacity in genomics through train the trainer programmes	TtT course page: Train the Trainer: Capacity building for genomic surveillance of AMR in low- and middle-income countries	Wellcome Connecting Science	Open in a new tab	Train-the-trainer; LMICS; antimicrobial resistance	building-institutional-and-regional-capacity-in-genomics-through-train-the-trainer-programmes
Blog article	Teaching strategies and curriculum implementation	Building Machine Learning Models for Predicting Antibiotic Resistance	Nicole Wheeler	Open in a new tab	machine learning	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	The FAIR Guiding Principles for scientific data management and stewardship	Mark D. Wilkinson; Barend Mons	Open in a new tab	findable; reusable; exemplar implementations	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	FAIR training materials	Leyla Garcia; Patricia M. Palagi	Open in a new tab	share; description; identity; registration; Interoperability; Reusability	teaching-strategies-and-curriculum-implementation
Website	Teaching strategies and curriculum implementation	Universal Design for Learning principles	Center for Applied Special Technology (CAST)	Open in a new tab	Engagement; Representation; Action; Expression	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action	Aleksandra Pawlik; Celia W.G. van Gelder; Aleksandra Nenadic ; Patricia M. Palagi; Eija Korpelainen; Philip Lijnzaad; Diana Marek; Susanna-Assunta Sansone; John Hancock; Carole Goble	Open in a new tab	Life sciences; bioinformatics; training; IT and computational skills; data analysis; capacity building; software carpentry; data carpentry	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	The African Genomic Medicine Training Initiative (AGMT): Showcasing a Community and Framework Driven Genomic Medicine Training for Nurses in Africa	Victoria Nembaware; Nicola Mulder	Open in a new tab	healthcare professionals; blended learning	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	OncoSim and OncoWiki: an authentic learning approach to teaching cancer genomics	Priska Schoenborn; Richard Osborne; Nick Toms; Karen Johnstone; Chlöe Milsom; Reema Muneer; Michael A. Jarvis; Robert Belshaw	Open in a new tab	cancer genomics; case study; precision oncology	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	The application of project-based learning in bioinformatics training	Laura R. Emery; Sarah L. Morgan	Open in a new tab	project-based learning; bioinformatics summer school	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Applying service design in competency‐based curriculum development	Jon Scoresby; Mary Tkatchov; Erin Hugus; Haley Marshall	Open in a new tab	competency-based education	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Integrating PCR Theory and Bioinformatics into a Research-oriented Primer Design Exercise	Amber L. Robertson; Allison R. Phillips	Open in a new tab	DNA primers; PCR; Pseudomonas putida	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Establishing a computational biology flipped classroom	Phillip Compeau	Open in a new tab	flipped classroom	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Problem-based learning in clinical bioinformatics education: Does it help to create communities of practice?	Angela C. Davies; Diane Harris; Amanda Banks-Gatenby; Andy Brass	Open in a new tab	medicine; group-centred problem-based learning; case studies	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Designing and running an advanced Bioinformatics and genome analyses course in Tunisia	Fatma Z. Guerfali;Dhafer Laouini;Abdellatif Boudabous;Fredj Tekaia	Open in a new tab	Bioinformatics; Genome Analyses	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	On the Job Learning: A Bioinformatics Course Incorporating Undergraduates in Actual Research Projects and Manuscript Submissions	Jason T. Smith; Justine C. Harris; Oscar J. Lopez; Laura Valverde; Glen M. Borchert	Open in a new tab	collaborative research; computational genetics	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Preparing the next generation of genomicists: a laboratory-style course in medical genomics	Michael D. Linderman; Ali Bashir; George A. Diaz; Andrew Kasarskis; Saskia C. Sanderson; Randi E. Zinberg; Milind Mahajan; Hardik Shah; Sabrina Suckiel; Micol Zweig & Eric E. Schadt	Open in a new tab	personal genome sequencing	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Evaluating the effectiveness of a practical inquiry‐based learning bioinformatics module on undergraduate student engagement and applied skills	James A. L. Brown	Open in a new tab	Bioinformatics; Qualitative assessment; peer-assisted learning	teaching-strategies-and-curriculum-implementation
Blog article	Teaching strategies and curriculum implementation	Active learning strategies for Bioinformatics teaching	Lex Nederbragt	Open in a new tab	Live coding; Jupyter notebook; peer learning; carpentries	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	An educational guide for nanopore sequencing in the classroom	Alex N. Salazar; Franklin L. Nobrega ;Christine Anyansi;Cristian Aparicio-Maldonado; Ana Rita Costa; Anna C. Haagsma; Anwar Hiralal; Ahmed Mahfouz; Rebecca E. McKenzie;Teunke van Rossum; Stan J. J. Brouns; Thomas Abeel	Open in a new tab	Oxford Nanopore Technologies; sequencing; bacteria; bacteriophage; genome	teaching-strategies-and-curriculum-implementation
Course description	Teaching strategies and curriculum implementation	Elective 8-week course on genomics and personalized medicine; Genetics 210	Stanford University	Open in a new tab	genetic variants; disease susceptibility; risk factors; complex genetic disorders; pharmacogenetics; population structure; genetic ancestry; ethics; clinical medicine	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Evidence That Personal Genome Testing Enhances Student Learning in a Course on Genomics and Personalized Medicine	Keyan Salari; Konrad J. Karczewski; Louanne Hudgins; Kelly E. Ormond	Open in a new tab	hands-on genomics; clinical genomic testing	teaching-strategies-and-curriculum-implementation
Article	Teaching strategies and curriculum implementation	Strategies for using peer-assisted learning effectively in an undergraduate bioinformatics course	Casey Shapiro; Carlos Ayon; Jordan Moberg-Parker; Marc Levis-Fitzgerald; Erin R Sanders	Open in a new tab	peer learning; tutorial training; genome annotation; bioinformatics	teaching-strategies-and-curriculum-implementation
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